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From seascape ecology to population genomics and back. Spatial and ecological differentiation among cryptic species of the red algae Lithophyllum stictiforme/L. cabiochiae, main bioconstructors of coralligenous habitats ArchiMer
De Jode, Aurélien; David, Romain; Haguenauer, Anne; Cahill, Abigail E.; Erga, Zinovia; Guillemain, Dorian; Sartoretto, Stephane; Rocher, Caroline; Selva, Marjorie; Le Gall, Line; Féral, Jean-pierre; Chenuil, Anne.
Ecosystem engineering species alter the physical structure of their environment and can create or modify habitats, having a massive impact on local biodiversity. Coralligenous reefs are highly diverse habitats endemic to the Mediterranean Sea built by calcareous benthic organisms among which Crustose Coralline Algae are the main engineering species. We analyzed the diversity of Lithophyllum stictiforme or L. cabiochiae in coralligenous habitats combining a multiple barcode and a population genomics approach with seascape features. Population genomics allowed disentangling pure spatial effects from environmental effects. We found that these taxa form a complex of eight highly divergent cryptic species that are easily identifiable using classic barcode...
Tipo: Text Palavras-chave: Engineering species; Cryptic species; Ecological niche; Coralligenous habitats; Ecological differentiation; Crustose Coralline Algae.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00487/59859/63014.pdf
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Separate the wheat from the chaff: genomic scan for local adaptation in the red coral Corallium rubrum ArchiMer
Pratlong, Marine; Haguenauer, Anne; Brener, Kelly; Mitta, Guillaume; Toulza, E; Garrabou, Joaquim; Bensoussan, Nathaniel; Pontarotti, Pierre; Aurelle, Didier.
Genomic data allow an in-depth and renewed study of local adaptation. The red coral (Corallium rubrum, Cnidaria) is a highly genetically structured species and a promising model for the study of adaptive processes along an environmental gradient. Here, we used RAD-Sequencing in order to study the vertical genetic structure of this species and to search for signals of local adaptation to depth and thermal regime in the red coral. Previous studies have shown different thermotolerance levels according to depth in this species which could correspond to genetic or environmental differences. We designed a sampling scheme with six pairs of ‘shallow vs deep’ populations distributed in three geographical regions as replicates. Our results showed significant...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00615/72745/71893.pdf
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